Dr. Deepali Singh


Assistant Professor

Biotechnology
University School Of BioTechnology
PhD, University of Delhi South Campus, New Delhi
Genomics, Plant Molecular Biology, Virology


Professional
Updates


Books

Edited Book:

·      RNA-Based Technologies for Functional Genomics in Plants. Editors Guiliang Tang, Sachin Teotia, Xiaoqing Tang, Deepali Singh. Springer Nature Switzerland AG 2021, ISBN 978-3-030-64993-7

Book Chapters:

Deepali Singh, Vartika Sinha, Abhinav Kumar, Sachin Teotia: Small RNAs and cold stress tolerance in Plant Small RNA Biogenesis, Regulation and Application [Praveen Guleria and Vineet Kumar (Eds)], Elsevier Inc (2020), ISBN 978-0-12-817112-7, pp 209-230.

Sachin Teotia, Deepali Singh, Guiliang Tang: Technologies To Address Plant Microrna; in Plant miRNAs - Shaping Development and Environmental Functions, [Celia Miguel, Tamas Dalmay and Ines Chaves (Eds)], Springer Nature Switzerland AG. (2020) ISBN: 978-3-030-35772-6.

Sachin Teotia, Deepali Singh, Guiliang Tang: DNA Methylation in Plants by microRNAs in Plant Epigenetics, [Nikolaus Rajewsky, Stefan Jurga, Jan Barciszewski (Eds)] Springer International Publishing (2017) ISBN: 978-3-319-55520-1

Deepali Singh and Sachin Teotia: Fungal Disease Management in Plants; in Approaches to Plant stress and their Management, [Gaur R.K. and Sharma P. (Eds.)], Springer, India Pvt. Ltd. (2013) ISBN: 978-81-322-1620-9

Sachin Teotia and Deepali Singh: Oxidative Stress in Plants and its Management; in Approaches to Plant stress and their Management, [Gaur R.K. and Sharma P. (Eds.)], Springer, India Pvt. Ltd. (2013) ISBN: 978-81-322-1620-9


Patents

NA


Journals

Aishwarya Chaudhary, Deepali Singh. In-silico analysis of the regulatory region of effector protein genes in Verticillium dahlia. Gene Reports (2022) Volume 27, 101533, https://doi.org/10.1016/j.genrep.2022.101533.

Aishwarya Chaudhary, Sachin Teotia, Deepali Singh. Tools for engineering resistance against pathogens in plants. J. Plant Biochem. Biotechnol. (2022). https://doi.org/10.1007/s13562-022-00767-4

Naveen Kumar, Aishwarya Chaudhary, Deepali Singh, Sachin Teotia. Transcriptional regulation of seed oil accumulation: role of transcription factors and chromatin remodelers in Arabidopsis thaliana. Journal of Plant Biochemistry and Biotechnology (2020).

Liang Z, Wang L, Wu H, Singh D, Zhang X. Integrative analysis of microRNA and mRNA expression profiles in MARC-145 cells infected with PRRSV. Virus Genes (2020). doi: 10.1007/s11262-020-01786-w

Liang Z, Li P, Wang C, Singh D, Zhang X. Visualizing the Transport of Porcine Reproductive and Respiratory Syndrome Virus in Live Cells by Quantum Dots-Based Single Virus Tracking. Virol Sin. (2020) 35(4):407-416, DOI: 10.1007/s12250-019-00187-0

Jitendra Kumar Verma, Vijay Wardhan, Deepali Singh, Subhra Chakraborty, Niranjan Chakraborty. Genome-Wide Identification of Alba Gene Family in Plants and Stress-Responsive Expression of Rice Alba Genes. Genes (2018) 28;9(4). pii: E183.

Singh, G., Fritz, S. M., Ranji, A., Singh, D., Boris-Lawrie, K. Isolation of Cognate RNA-protein Complexes from Cells Using Oligonucleotide-directed Elution. J. Vis. Exp. (119), e54391, (2017).

Teotia Sachin, Singh Deepali, Tang X, Tang G. Essential RNA-Based Technologies and Their Applications in Plant Functional Genomics. Trends Biotechnol. (2016), pii: S0167-7799(15)00248-6.

Deepali Singh, Ioana Boeras, Gatikrushna Singh and Kathleen Boris-Lawrie. Isolation of cell-associated and virion-associated HIV-1 RNPs. HIV Protocols (2016), Methods Mol Biol. 2016;1354:133-46.

Matthew Stake*, Deepali Singh*, J Marcela Hernandez, Rebecca Kaddis, Leslie J Parent, Kathleen Boris-Lawrie. HIV-1 and two avian retroviral 5' untranslated regions bind orthologous human and chicken RNA binding proteins. Virology (2015), 486:307-20. * equal contribution

Deepali Singh, Robert Haicour, Darasinh Sihachakr, and Manchikatla Venkat Rajam. Expression of rice chitinase gene in transgenic eggplant confers resistance to fungal wilts. Indian Journal of Biotechnology (2015), 14(2) 233-240.

Deepali Singh, Annick Ambroise, Robert Haicour, Darasinh Sihachakr, Manchikatla Venkat Rajam. Increased resistance to fungal wilts in transgenic eggplant expressing alfalfa glucanase gene. Physiology and Molecular Biology of Plants (2014) 20(2):143-50

Chen WY, Singh D, Lai LB, Stiffler MA, Lai HD, Foster MP, Gopalan V. Fidelity of tRNA 5'-maturation: a possible basis for the functional dependence of archaeal and eukaryal RNase P on multiple protein cofactors. Nucleic Acids Res. (2012); 40(10):4666-80

Cheryl Bolinger, Amit Sharma, Deepali Singh and Kathleen Boris-Lawrie. RNA Helicase A modulates HIV-1 translation and infectivity. Nucleic Acids Research (2010); 38(5):1686-96.

Rajam M.V, Chandola N, P SaiPrasad Goud, Singh Deepali, Kashyap V, Choudhary M. L, Sihachakr D. Thaumatin sweet protein gene confers tolerance to fungal pathogens as well as abiotic stresses in transgenic tobacco plants. Biol. Plant (2007) 51, 135-141.


Conference Proceedings

NA